Interdisciplinary project: A GPU implementation of the BM4D denoising filter and evaluation of a deep learning segmentation network for the analysis of calcium image time series

Date: August 20, 2016

Implementation of the volumetric denoising filter BM4D on GPU using CUDA. The resulting GPU implementation is 116x times faster than available original CPU implementation. Evaluation of the fully-convolutional U-Net for the cell segmentation in the calcium time-series.